@hackage diversity0.7.0.0
Return the diversity at each position for all sequences in a fasta file
Installation
Dependencies (10)
- MonadRandom >=0.3 && <0.4
- base >=4.6 && <4.9
- containers >=0.5 && <0.6
- data-ordlist >=0.4 && <0.5
- fasta >=0.7 && <0.8
- math-functions >=0.1 && <0.2 Show all…
Dependents (3)
@hackage/acme-everything, @hackage/too-many-cells, @hackage/birch-beer
Find the diversity of a collection of entities, mainly for use with fasta sequences. Produces a binary which works on fasta files to find the diversity of any order and rarefaction curves for a sliding window across all positions in the sequences. To analyze just a collection of entities, just use the whole sequences and list flag.