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dialign-t

Source: dialign-t
Package: dialign-t
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Description: Segment-based multiple sequence alignment
 DIALIGN-T is a command line tool to perform multiple alignment of protein or
 DNA sequences. It is a complete reimplementation of the segment-base approach
 including several new improvements and heuristics that significantly enhance
 the quality of the output alignments compared to DIALIGN 2.2. For pairwise
 alignment, DIALIGN-T uses a fragment-chaining algorithm that favours chains of
 low-scoring local alignments over isolated high-scoring fragments. For
 multiple alignment, DIALIGN-T uses an improved greedy procedure that is less
 sensitive to spurious local sequence similarities.
 .
 DIALIGN-T has been published in Amarendran R. Subramanian, Jan Weyer-Menkhoff,
 Michael Kaufmann, Burkhard Morgenstern: DIALIGN-T: An improved algorithm for
 segment-based multiple sequence alignment. BMC Bioinformatics 2005, 6:66.

This Description was in lenny from 2007-12-06 to 2008-05-22;
This Description was in sid from 2007-11-23 to 2008-05-12;

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parts-md5sum:

332158c4249267a46d8e2fc2e3aea014 cs da de es fr it ja pl pt pt_BR zh_CN     77050 77051 
1f6d43d774e8d4cd91034c2a0e29f01f cs de es fr ja pt_BR     
6883a88ebc027690213f6ff746e9ef1d cs de es fr ja pt_BR

dialign-t

other Descriptions of the dialign-t package: