edlib-aligner

Source: libedlib
Package: edlib-aligner
Versions: edlib-aligner (1.2.3-1), edlib-aligner (1.2.3-3), edlib-aligner (1.2.3-4), edlib-aligner (1.2.3-5), edlib-aligner (1.2.4-1), edlib-aligner (1.2.4-2), edlib-aligner (1.2.4-2+b1), edlib-aligner (1.2.4-2+b2), edlib-aligner (1.2.4-2+b3), edlib-aligner (1.2.4-2+b4), edlib-aligner (1.2.6-1), edlib-aligner (1.2.7-2), edlib-aligner (1.2.7-2+b1), edlib-aligner (1.2.7-3), edlib-aligner (1.2.7-3+b1), edlib-aligner (1.2.7-3+b2), edlib-aligner (1.2.7-4), edlib-aligner (1.2.7-4+b1), edlib-aligner (1.2.7-4+b2), edlib-aligner (1.2.7-5), edlib-aligner (1.2.7-5+b1), edlib-aligner (1.2.7-6), edlib-aligner (1.2.7-6+b1), edlib-aligner (1.2.7-6+b2), edlib-aligner (1.2.7-6+b3), edlib-aligner (1.2.7-7), edlib-aligner (1.2.7-7+b1), edlib-aligner (1.2.7-7+b2)
Prioritize: 44
Description: edlib sequence alignment tool using edit distance
 Edlib is a lightweight and super fast C/C++ library for sequence
 alignment using edit distance.  This package provides an aligner
 using this library.
 .
 Features of libedlib
 .
  * Calculates edit distance (Levehnstein distance).
  * It can find optimal alignment path (instructions how to transform
    first sequence into the second sequence).
  * It can find just the start and/or end locations of alignment path -
    can be useful when speed is more important than having exact
    alignment path.
  * Supports multiple alignment methods: global(NW), prefix(SHW) and
    infix(HW), each of them useful for different scenarios.
  * You can extend character equality definition, enabling you to e.g.
    have wildcard characters, to have case insensitive alignment or to
    work with degenerate nucleotides.
  * It can easily handle small or very large sequences, even when finding
    alignment path, while consuming very little memory.
  * Super fast thanks to Myers's bit-vector algorithm.

Description-da: Edlib-sekvenssammenligningsværktøj der bruger edit distance
 Edlib er et simpelt og super hurtigt C/C++-bibliotek til
 sekvenssammenligning via edit distance. Denne pakke tilbyder en
 sammenligner, der bruger dette bibliotek.
 .
 Funktioner i libedlib:
 .
  * Beregner edit distance (Levehnstein distance)
  * Kan finde optimale sammenligningssti (instruktioner om transformering
    af den første sekvens til den anden sekvens)
  * Understøtter flere sammenligningsmetoder: global(NW), prefix(SHW) og
    infix(HW), hver af dem nyttige i forskellige scenarier
  * Du kan udvide tegnlighedsdefinitionen, så du f.eks. kan have jokertegn,
    for sammenligning uden hensyn til store/små bogstaver eller til at
    arbejde med degenererede nukleotider
  * Kan nemt håndtere små eller meget store sekvenser, selv når
    sammenligningsstier skal findes, men med meget lille hukommelsesforbrug
  * Super hurtig takket være Myers' bit-vektor algoritme

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